Documentation (VF 2.0)
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  • Documentation
    • Introduction
    • General Features
    • Installation
      • Prerequisities
      • VirtualFlow 2.0
      • VFTools 2.0
      • Uninstallation
    • Backgrounds and Principles
      • Directory Structure
      • Input & Output Databases
      • Job Organization
    • Using VirtualFlow 2.0
      • VirtualFlow 2.0 Commands
      • Preparing the Workflow
      • Starting the Workflow
      • Controlling the Workflow
      • Monitoring the Workflow
      • The Completed Workflow
    • Running VirtualFlow 2.0 in the Cloud
    • Troubleshooting
    • Version History
    • Further Resources
  • VFLP 2.0
    • Introduction
    • Features
    • Installation
      • Prerequisities
      • External Packages
    • Background and Principles
      • Directory Structure
      • Input & Output Databases
    • Using VFLP 2.0
    • Troubleshooting
    • Version History
  • VFVS 2.0
    • Introduction
    • Features
    • Installation
      • External Packages
    • Background and Principles
      • Directory Structure
      • Input & Output Databases
    • Supported docking programs and scoring functions
    • Using VFVS 2.0
      • Preparing the Workflow
      • Monitoring the Workflow
      • The Completed Workflow
    • Troubleshooting
    • Version History
  • VFU 2.0
    • Introduction
    • Features
    • Installation
      • External Packages
    • Background and Principles
      • Directory Structure
      • Input & Output Databases
    • Using VFVS
      • Preparing the Workflow
      • Monitoring the Workflow
      • The Completed Workflow
    • Troubleshooting
    • Version History
  • VFTOOLS 2.0
    • Introduction
    • Installation
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  • Prerequisites
  • Linux Cluster with Batch System
  • Python
  1. Documentation
  2. Installation

Prerequisities

PreviousInstallationNextVirtualFlow 2.0

Last updated 2 years ago

Prerequisites

Described on this site are the general prerequisites, which are required for all modules of VirtualFlow 2.0. But in addition, each module of VirtualFlow 2.0 has individual prerequisites as described in the corresponding sections:

  • ​ ​

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Linux Cluster with Batch System

VFLP 2.0 runs on Linux clusters which are managed by a batch system (resource manager), or cloud computing platforms on top of which a batch system is run. Currently, the following batch system is supported:

  • SLURM

  • AWS Batch

Python

VFLP 2.0, VFVS 2.0, and VFU were only tested with Python 3.9.4 and higher. If the system Python is older than 3.9.4, normally the system admins of the Linux cluster can make a newer version available. Alternatively, one can compile a recent version of Python by oneself and install it locally (for instance in the home folder).

VFLP 2.0 - Installation - Prerequisites
VFVS 2.0 - Installation - Prerequisites
VFU 2.0 - Installation - Prerequisites ​