Tutorials (VF 1.0)
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  • Tutorial Overview
  • Tutorial 1: VFVS - Preconfigured Example (Bash)
    • Introduction
    • Installation
    • Setting up the Workflow
    • Starting the Workflow
    • Monitoring the Workflow
    • The Completed Workflow
  • Tutorial 2: VFVS - Preparation from Scratch (Bash)
    • Introduction
    • Installation
    • Setting up the Workflow
    • Starting the Workflow
    • Monitoring the Workflow
    • The Completed Workflow
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  • Choosing the Installation Location
  • Installing VFVS
  1. Tutorial 2: VFVS - Preparation from Scratch (Bash)

Installation

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Last updated 1 year ago

Choosing the Installation Location

VirtualFlow should be installed on a fast shared scratch file system, rather than the home directory (which is often slow and/or has insufficient I/O capacities).

After having chosen the installation location, go to the directory were you want VFVS and the workflow files to be stored:

cd <installation directory>

[For more information about the installation location, see the in the documentation.]

Installing VFVS

The tutorial files can be downloaded with the wget command:

wget https://github.com/VirtualFlow/VFVS/archive/refs/heads/vfvs-1.tar.gz

Then, the files can be extracted with:

tar -xvzf vfvs-1.tar.gz

Then we can rename the directory to something more meaningful. In our case we choose as name VFVS_GK (for glucokinase), since this is the target we will use:

mv VFVS-vfvs-1 VFVS_GK

[For more information about installing VirtualFlow in general, see the in the documentation.]

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