> For the complete documentation index, see [llms.txt](https://docs.virtual-flow.org/documentation-vf1/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://docs.virtual-flow.org/documentation-vf1/vflp/using-vflp.md).

# Using VFLP

The usage of VFLP is the same as the usage of VirtualFlow in general, which is described [here](/documentation-vf1/using-virtualflow.md). 

All specific options/features which one can activate/configure in VFLP are described in the control file `tools/templates/all.ctrl`, where the values for all of them can be specified. These options/features include:

* Neutralization
* Desalting
* Tautomerization
* Protonation
* 3D Conformer Generation
* Target Format Generation


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